YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|120598673, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHPMLTIAVR AARAAGQTIM RAYTELDRVE VSAKGINDFV TSVDKEAEAA ITYQIRKSYP  60
   61 DHTIVGEENG ENRGSNKDYI WIVDPLDGTN NFIRGIPHFA VSIALQHKGK TEVAVVYDPV 120
  121 REELFTAIRG KGAKLNDFRI RVTNVNELAP TMIGTGFPFK SRQHTETYMA IFGEVFSQCS 180
  181 DLRRAGSAAL DLAYVAAGRL DGFFEIGLKP WDIAAGDLIC REAGGTVTDF TGNHNYLVSG 240
  241 NIVAGSPKVT TELVKIMRPL LNEGLKR

Type	Start	End	Confidence
Signal Peptide	1	14	0.61
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	267	0.99