YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|120557707, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNKASLTVY SRRLLLCFIT WSVTLSVPTS ASPSHPNSFS QAKTKSQTLY AGNRQGMLPA  60
   61 VSFYCGCDIQ IKGKSWKPDL TSCGYQVRKQ ETRANRIEWE HIVPAWEFGH QLQCWQKGGR 120
  121 KNCADNSNEF NKMEADMHNL VPAIGEVNGD RSNFRFSEWN GKANQYGQCA IVVDFKNRQV 180
  181 QPPANTRGKI ARTYLYMQQT YGLKIASSQL KLFKAWDKTY PVDTIECQRD NAIAQVQGNH 240
  241 NPFVQNACNA PPQRQQLAE

Type	Start	End	Confidence
Signal Peptide	1	31	0.99
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	259	0.99