YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77814837, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKFSGLSKD IGHAKRGRVG VLLLNLGTPD APTASAVRRY LAEFLSDPRV VEIPKLIWML  60
   61 ILHGIILRVR PAKSAALYEK VWTQAGSPLM DISLRQTAKL TDKLASEGLD VSVHLAMRYG 120
  121 NPSVANTLQN MHKQGIDKIV VLPLYPQYAA PTTGSAFDAI AKELSQWRYI PSLHFINTYH 180
  181 DHPDFIEALA GSIRADFENH GKPQKLVLSY HGMPERNLHL GDPYYCFCAK TTRLVTEKLG 240
  241 LSQDEFVMTF QSRFGKAKWL QPYTDATMQA LPKAGVRDVA IVCPAFSADC LETLEEIVGE 300
  301 NGHIFTEAGG NKFRYIPALN DDDAHITMMA NLVRPYL

Type	Start	End	Confidence
Signal Peptide	1	36	0.80
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	337	0.99