YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77810338, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.73
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRFPFGLRT KVIGLSLFLL CLPWLGYQYV WEMEKYLRHG QERTLEGTTQ ALATALHERP  60
   61 KLFDGQASFL KQVEKSRDLY AYPLAGAILL DGKLNEWQEY QHRFIQYGEA NQIMRADPTT 120
  121 PLTLSFTHMV GQYDGYLYAF FQVVDPNVVF RGKNALSVDR NDHLSIATLS PDNKFKRYIV 180
  181 ATTQPGWISA FELPANPKLT VPVTPEVRIQ GQWATTDVGY NIELRIPLNM VGSKLGFAIA 240
  241 DVNDSKYRDI TAIVGTSALD TVDKLGTVLV PSPEIESIIK GMSHYSSRVW VVDKHGRVLA 300
  301 KSGDLRANSS VWTRTLEDET PGSLWGSFKR DYLHPLYYKI LTKPPKDFID SLQDSTELDG 360
  361 SHIQKALSGQ QSSTWRLTPD NKAVVLAAAS PIWIDNNVMG AVVAEETTHG IRTLRNRALE 420
  421 KLFNVILTIM SMGTLALFFF ASSISNRIRK LRDEAENAID SQGRVRNNLK PSKARDEIGD 480
  481 LSRSFSSIVG RLGQYTHYLE NMSSRLSHEL RTPVAVVRSS LEHLNLQTLD QDAQKYVDRA 540
  541 QEGVSRLSMM LNNMSEATRL EQSLLQADIT KFPLSQVISG CMQGYQITYP EQRFSVKVPE 600
  601 QPLMMQGVPE YIAQLMDKLI ANAIEFCHKD SAIEVTLTQI GKQATLLISN LGPELPIDMS 660
  661 EQIFDSMVSV RINQAQDKPH LGLGLYIARL VAEFHQGKIL ARNRSEHDGV DILVTLPLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle