YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|124549362, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPANNHGIK RIFRATGFSM KGLKAAWTHE AAFRQELVLC LVMLPIALLV DISTIERLML  60
   61 IFTLFIVLIV ELLNSAIEAV VDRVGSEIHP LSGQAKDIAS AAVFISLTLC GITWLSILAP 120
  121 LFL

Type	Start	End	Confidence
Cytoplasmic	1	31	0.82
Transmembrane Helix	32	52	0.77
Non-Cytoplasmic	53	57	0.54
Transmembrane Helix	58	81	0.81
Cytoplasmic	82	97	0.67
Transmembrane Helix	98	119	0.92
Non-Cytoplasmic	120	123	0.52