YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KAD_SHEAM
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIILLGAPG AGKGTQAQFI MEHYGIPQIS TGDMLRAAVK AGTPLGLEAK KVMDAGQLVS  60
   61 DELIIGLVKE RIAQDDCANG FLLDGFPRTI PQADAMAANG ISIDHVIEID VPDEEIVNRM 120
  121 SGRRVHPGSG RVYHVVFNPP KVEGKDDVTG EDLVIRPDDE ESTVRKRLGI YHEQTKPLVD 180
  181 YYGKVAAEGN TKYTKFDGTQ SVAEVSKLIQ AALS

Type	Start	End	Confidence
Signal Peptide	1	17	0.88
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	214	0.99