YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|119766926, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHPMLTIAVR AARAAGQTIM RAYTDLDRVE VSTKGINDFV TSVDKEAEAA IVYQIRKSYP  60
   61 DHTIVGEEQG ENRGTNKDYI WIVDPLDGTT NFMRGIPHFA VSIALQYKGK TEVAVVYDPV 120
  121 RDELFSAVRG QGAKVNDFRV RVSNVQDLNG TIIATGFPFK SRQHTQTYMN VLNEVFAQCA 180
  181 DLRRAGAASL DLAYVAAGRM DGYFELGLKP WDIAAGDLIV REAGGTVTDF TGGHNYLMSG 240
  241 NIVAGSPKAT TALVKTMRPL LNEALKR

Type	Start	End	Confidence
Signal Peptide	1	14	0.61
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	267	0.99