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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119766852, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKQFHCVTV GNPNAGKSTL FNALTGANQQ VGNWSGVTVE KKTGHFSLSG ADVYLTDLPG  60
   61 IYDILPAGKS CDCSLDEQIA QQYLAEQHMD GIINLIDATN IERHLYLTVQ LRELGIPMVV 120
  121 VVNKIDIALK RGVHVDIQKM SQELGCPVIA VCAREAKDVL KVQEQVVALL EGKVSEAPLM 180
  181 LGYESAIERA VAELMEKDNG LSRGRALAML GNGLGCGQCK NSEFESEVSR CADGLKAKGL 240
  241 DIELMVATTR FNFVERVYRA AVANDDAPTL SDRLDGLVLH PVLGVPVFLL VMYLMFMFAI 300
  301 NVGSAFIDFF DITAGALFVD HFGALLGNWG APEWLVTLLA GGIGQGIQTV ATFIPVIMAL 360
  361 FLALSVLESS GYMSRAAFVV DGLMRRIGLP GKAFVPMIVG FGCSVPAIMA TRTLGSERER 420
  421 IVTGMMAPFM SCGARLPVYA LFAAAFFPES GQNLVFLLYI IGIIAAIGTG LLLRSTLLPG 480
  481 VSSAVVMELP NYEMPKFKAV VSRTGKRTKS FILGAGKTIV LVVTLLNFIN AVGVDGTFGH 540
  541 EDSSESVLSV VSQKVTPIFS PMGIEEGNWP ATVGIITGIF AKEAVVGTLN SLYSTPGADE 600
  601 EGLTPLSESV SEALATIPAN LLGIAPEDPM SMSVGDVSSV DTAAEEQGVD RSTFSALQSG 660
  661 FSGQLAAFSY LVFVLLYTPC VAAMGALVNE FGKGWAVFAA TWTFGLAYGT ATLVYQWGNV 720
  721 AVHPLQTLLW TAVIAGALIA FFIYLKQKGR KTQQIIPGIR IITE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle