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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68546987, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTKASLVAL ALAGVSANVF AADNLVISEY VEGSSNNKAI ELYNPTAAAV DLSQYQLKFY  60
   61 FNGNSTAGSN IALSGILASG ATFVVADNDA SADILNRTQL ASNASFFNGD DAIVLEHLGS 120
  121 VIDSLGQIGV DPGSQWGSGL LSTADNTLRR DGANLVADTD PYDAVTLSNW IGFAQDDFSN 180
  181 LGQFSSGPTD PTDPTDPTDP PAEGMVCGTS ATAIHSIQGA GTTSPMVGQI VEVEAVVVSN 240
  241 QEAGLKGLFL QMADAEQDSD VQTSEGVFLY TGNAPTGYLV GDRVRVKAKV VEYQGLTELT 300
  301 NLTDKTLCAT AQPLPTAAAL SLPVNDVTEL EAFEGMLVNF SQNLVVNEVY NLGRYGEIML 360
  361 GGRRHVIGTQ VAAPGADALA VTAANQRDSI LLDDGLTSQN PDPVIYPAPG LSATNTVRVG 420
  421 DTVTNLTAVM HYGFGVYRLM PLDTVNFVAS NPRTDAPALD AGNLKVASFN VLNYFNGDGL 480
  481 GGGFPTARGA NTAVEFERQR AKIISAMKAI DADILGLMEI ENDGFGSESA IADLVNGLNA 540
  541 ATEAGRYGYI DPAVPAIGTD AISVGIIYRT DKVTPEGAAA ILDSSNSAVD EDGKVLFNDQ 600
  601 KNRPMLAQAF RHLETDEPVV VAVNHFKSKG SDCVAENDPD LGDGQGNCNL TRTRAAKAVG 660
  661 EFLNTEFADA PVLVIGDLNS YAMENPLTAL NEAGLTELFA HLGKESAYSY VFSGESGQLD 720
  721 HALANVALLE KVVDVTEWHI NTDEPRILDY NVEFKSAGQV ESLYSMDAYR SSDHDPVVIS 780
  781 LELERANELP VANFSYQVRG RKVAFVANAT DADGGINAIH WNFGDGTEAM GDAVEHKFAN 840
  841 RGVYQVSLTV TDNLGGSTTV TQQVGVGVNA DNKAPVAAIE HLDFGLFHLF VSASYDTDGR 900
  901 IRKQLWQFND GARFASSVVL RRAGSASEVN LTVTDNDGAT DSTSLRF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle