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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68515450, gi|...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTAHNMTKY SLRSWVLVLA LAPTILVGIL LGSYFTINRF YDLEDTLKDM GSNIIEPLAI  60
   61 SAEQSLSTNN REITKILLAR AQLNKSTLVK SIAIFDINNQ LFVTSHYHKD FEVMRYKEAL 120
  121 ESLKETQFEH EGDTLIVRTP IFAISSKQPM GDNIDEGSGR FSEAVVMPDN SNAALLGYVS 180
  181 MMLNKEKALL EQHRAAVAAF IIVLIGVQLN LLFTFRLVKN VTQPITDMVK LVGKIREGKL 240
  241 DARLEGNLIG ELDLLNRGIN AMAASLSEYH DEMQQNIDQA TSDLRETLEQ IEIQNIALDR 300
  301 AKKDAQEASR IKSEFLANMS HELRTPLNGV IGFARQLLKT PLHSSQMEYI KTIERSATSL 360
  361 LQIINDILDF SKLEANKMVL ETMPFGLRAS LEDTINLLAG SAHAKGLEFV VDVDANVPEN 420
  421 LSGDVMRLGQ VMTNLLGNAI KFTEEGSVHL KISLASLEDN NLTLRCEVTD TGIGIDPEQQ 480
  481 ELLFQAFGQA DSSISRRYGG TGLGLVITKR LVVQMMGGRI GFHSEVGKGS SFWFTVPLQL 540
  541 SPFPVHDTLP LEKLIGHSVL LFEPRKLTRE SIARKLKDWH MMVTLASNED ELERHLDDRH 600
  601 YDAILLSGQS CESCEDLQRH LSRVKDHTGS LLLLNDCLDP EVYTQEMEPF VDLVLQLPVS 660
  661 ELKLAQNLIF PPVKKNAAPK PALATKPSAR HPLNVLAVDD NLANLKLIDT LLKELVANVV 720
  721 AVSSGDQAVA LAKSRSFDLI FMDIQMPGTD GVTATRLIRQ DSLNRNTPII AVTAHAINEE 780
  781 RERIQASGMD GYLPKPIDEA ALKGVISRWL TRPKFTHFDS NTLNWELCLS QANQKEDLAI 840
  841 DMLKMMLESL PGTVNDIELA MARSDNESML YTVHKLHGAS CYCGVPTTQK LCQQIESALK 900
  901 GGADVADVEP EILELLDELT KVESAATQVI SQMSAEVPNE F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle