YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68546437, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.25
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVSMAFAFT GWYQFHQYIN DLKEERFEDM AQELKLAIET RMLAYEQVLR SGVGLFKASN  60
   61 GVSRSEWRTY VANAKLDKYY PGIQGVGFSQ VVRKPQLQAF EAAVRAEGFP AFKVYPDGDR 120
  121 PIYHSILYLE PFDWRNQRAF GYDMYSEPRR RRAIDWATET GNAAISGKIT LVQETGEDLQ 180
  181 AGFLMYLPLY ARDNAPSGDT LLGTVYAAFR MDDLIRGILG NRFTQLQLEI FDGGELIEDN 240
  241 LMFRSPRADS WRLQTELPIE MGGQKWLLHV GSNEDFLSQS EAFQSQLMLF MAVVFQLLMF 300
  301 YFLLSIAKAR HQESLLSREI MNNESRFRLV VEASPSALII TNRRGVITLV NKHTEQLFGY 360
  361 TREELLGKSV NVLLPEALAK VHQGHMESYL ANPIAKKMSL RDELYGRTKS GGLVPVEVGL 420
  421 TPIHFASGIS VLATINDISV RRNIEEQRMA HTLELERINK ELDSFAYIAS HDLKSPLRGI 480
  481 EQLAQWIEED LKGKLDPSTG KYLQLIQSRI QRMSQLLDGL LLYSRIGRAE ESFSPVEVKS 540
  541 LIKDIFTLVA PPVGFNLKLC GEFSTINTAK VPLELVIRNL FSNAIKHHDK GEGEISVSVE 600
  601 SCGDMLKFCV ADDGPGIPAE YQEKVFNIFQ TLKARDEVEG CGLGLSLVRK TVERYGGKVW 660
  661 LISQGRGCQF WFSWPKQLGA QKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle