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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|145563278, gi...
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRQAKTKQA SKKQKPQLIH WRLYVVVGFV FALFSSLVGR AAYIQIIEPD KLRHESDMRT  60
   61 LRTTSREVQR GLITDRNGDM LAVSVPVRAV WADPKQVNDS NSFADMRRWQ ALADVLHEPL 120
  121 ADVLDRVRSN PTKRFTYLKR QVTPAVADYI TQLKLPGVFL KSESRRYYPG GEITAQLIGI 180
  181 TNIDDVGIEG VENAYNSWLT GTPSKQKVRK SRDGHVVEHL DIVQEGESPN DLVLSIDHRI 240
  241 QQLAYRELKR TTEMNQATSG SIVVLDIHTG EVLAMVNTPS YNPNSRDNLQ TFRMRNRAMT 300
  301 DTFEPGSTIK PFVVAAALEA GTVKATDIIP TSPGWMRLGG RQVRDPNNYG DMSLARILAK 360
  361 SSNVGISKLA LSIPVQQLLG TYQSMGLGSF SGINLTGESA GLIQDRHRWS DFERATLSFG 420
  421 YGLTATTLQL ARMYATLGNG GTLYPVSILK LKKPPEGERV ISAKVARDVL QMLVTVTEKG 480
  481 GTGTLAHIDG YPVAGKSGTS RKAVAGGYGD DYVALFAGVA PANNPKLAIV VVVNEPKGDL 540
  541 YYGGSVAGPA FAKVMSGALQ MLNVEPISDK EQVQLAGIAG RAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle