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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77811082, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKDDFPKYF DSPKNFYFSV LSSSWMVITA ALFFMGVSWY VLEVYLRDRG EERFNNNVQE  60
   61 LIEAVNSRMI VYEQVLRGGI GLFLASDGVT REEWQTYVVN ARLIEYYPGI QGFGYTPLLT 120
  121 PETLEAHVNQ VRTEGFSEYN VYPQGERDLY CVIQYLEPFD WRNQRAFGFD MCSETNRRSA 180
  181 ILSSIATGMP TISGKVILVQ ETQDNTQSGF LMYLPLYQGQ ATTDEERKQR AVGVIYAAFR 240
  241 MDDLMQGIMG NRFSGLTLAI YDGENANAES LMFTSNKLLP SPQDLFYQSQ TAIIEGRVWR 300
  301 LDISSESAFI SSSEQTQSFW LQLIGCGFIL ALFYSVVVMA RNRYQESRLT SELIANEKRF 360
  361 RLVIEASPSA LFMIDRTGVI TLVNTHAERL FGYAREELLG HSINMLLPKG LWDIHQQHMS 420
  421 NYLVQPIAKN MSMRDDLFGC CKDGSRLAIE VGLTPIHFSN GLSILATINN VSERKRVEIQ 480
  481 RAQHTKELER INQELDRFAY IASHDLKSPL RGIEQLTSWL AEDLVDNTNE NVQKYLGLIQ 540
  541 NRIHRMVLLL DGLLMFSRIG RVDAEIVEVD ARQLIEDMFE LVAPPQGFEL LLEGEFPNFK 600
  601 TVKTLLELVV RNLMSNAIKH HDRDTGVIKV QCEPKGDVYW FSVVDDGPGI SKAYHGKVFE 660
  661 MFQTLKPRDE VEGSGLGLSL VKKTIESLGG EIKLESEGRG CRFRFSWPVR IVNKEVL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle