YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82721436, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSHSLKSF NTFGLSQCCS ALVEAHSKED IKHICLPLWQ DQQPLLVLGG GSNVVFTDDF  60
   61 HGTVVRVLSK GIKVSEDAVY FYLEVEAGEN WHELVEFTLA NGMPGLENLA LIPGTLGAAP 120
  121 IQNIGAYGVE FCDVCDWVEY LDLDSGDFFR LTATECQFSY RESIFKGALR GRAVITAVGL 180
  181 RLVKQWQPHL AYGPLQSFDP ASVTAADIFN KVCQVRREKL PDPNVLGNAG SFFKNPIVSA 240
  241 ACYLELAQRF STIVGYAQAD GSVKLAAGWL IEQAGLKGFI LGKAAVHDKQ ALVLVNRGGA 300
  301 TGQDICRLAQ HVIERVNDTF GVLLEAEPKI IGVTGEGDLH V

Type	Start	End	Confidence
Signal Peptide	1	27	0.91
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	341	0.99