YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82718696, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.70
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSKYPQAGF TLIELVVVIL LLGILAVVAL PKFVNIQQDA QIASVKASAG GFKTGLNLAR  60
   61 SVWAVKVGSG PSEDLPVFGT AQSEQVDFNA FGWPAQHYIY GNEASPVLDN VEDCVSVWQV 120
  121 LFQNALPSVS RLNIDADDTD YKASYISPSQ CKYSYRANDK LAVYYDSRDG TVTTDLDPNS 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	9	0.60
Transmembrane Helix	10	30	0.67
Non-Cytoplasmic	31	180	0.94