YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77811547, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHFSALPIF VTVVECGSFS DAGQKLGLSK SAVSKRITLL EQSLGLQLLH RTTRSLSLTE  60
   61 AGARYYNYVC PAVQLAQEGL DAISELQQAP QGHLRISVPM VFGRVYIAPL IAEFLRRYPD 120
  121 IQLQMHMDDK TTDLITGGFD LAIRIGELPD SSLIARKLAP CLSVICAAKD YLAQHGLPST 180
  181 PAALTQHNCL FYSYFQDGVE WSFQSPNGVQ RVQPKGNYQV NNSDAIHQAC LDGLGIANLP 240
  241 RFIVEPDLQT GRLQALLTDY PLPEHGIYAV YPQRKYLPTK VSVLIAFLME KLTSSKLG

Type	Start	End	Confidence
Signal Peptide	1	16	0.54
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	298	0.98