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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|146291680, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRFLMILNL ALRYQTHYMR GLLSNLLLIF FILTSSPTYA AIDCNSVFPG PIQSFSSTGE  60
   61 LYMQSGALIE NYNVLDVCFK TVKNYHEMNV NACGIGKCQI SGTASLARAA PTFVNSSTSA 120
  121 TNIVANWTTP SVELGTTAGY GQRFNSSRWD IGTLTINTGG NVTVSDAYST YVIKDLTFFN 180
  181 SSIMTLKAGK TYIIDGDLNL NSGTLNIVGT GDTKLYIKGN FTIALSSVFN APTSVDVYVG 240
  241 NRLEVQSNAQ IQGSYYVADD ATLLNSAVLV GRLSAKNVTL QSNSKVIYDA GAPVLQCFND 300
  301 TFSQSALSSD WVVSRSSGSF TPSIVGGRMR LTQASQKQST ASTYQRLFPA AENLVEIQFD 360
  361 HYAYGGATNN GADGIAVVLS DAAITPQPGA FGGPLGYGFK PGISGFAGGW LGVGIDEFGN 420
  421 FSGEGGSINL SGQRRQSVVV RGSGAGTSGY RYLRGTCNNG TTNTSGSCLS PTVDKNNVTP 480
  481 AHRYKITIDS QSAGQSLVKV ERNTGSGFVT LISSFNAAAQ TGQATIPKDF LLSLTGSTGD 540
  541 YYNNHEIDNV QICALKSNPI TTQIDHFEFD HTGQGLTCNP ETVTIRACAN TSCSQLFTEP 600
  601 LTATLLPEST AEGVWVGGNQ VSFSGGTAQL QLRRNTAGVV TLGVKGSSPT TRPLSKTLCR 660
  661 IGAGALSENN CSLTFADSGF IFDVPDKLAN KPVEVLVKAV KKSDVTQQCI PSFQNQAKSL 720
  721 SFWSQYVEPS APITPKAVTI NSTAISAASA VPTALSLGFD INGQAKITVN YPDAGKLQLN 780
  781 AQYTGNGTEQ GLVMTGSDQF VSVPAGLCVK PVNATAVCPS ANMSCNVYRK AGQTFGMTVQ 840
  841 AVAWQADNDS DFCSGNLPTP NFSDDSMMLA SKVVAPTIAS GANNGVLGVT SYSHSAQTNN 900
  901 LNTINNQTIS EVGVFQISAT ASANYLGTST SLNIPTAYSA NIGRFVPDRF LIGDISVLPA 960
  961 CGGFSYMDQP FPMSMSIKAL NIGGTITQNY FPPFSFATAK LVGENNNNGV DLQNRLSALP1020
 1021 IKADSWSQGM ATVDGSFRAN VNRVTPNMAA NLYEDGPFEL LDIGVQVSDN DPHPNGIFSY1080
 1081 VASPDMDAAS TGACTNCNAK KITTQILRHG RVVMDNTYGP ETEVLKMPTR AEYWNGTNWV1140
 1141 LNGDDSCTIA TYGLGSQVDN AGLGYHFDPN LATGQSVVRS GGTSTFQSGQ FELLWRAVAT1200
 1201 SGPLYRGQVT APLDVPAWLE WYWNWNGVSP TSLSEPRASA FFGRYRGHDR IIYWREVN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle