YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77813290, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLQAANGRL IVWLTLFIGL LSQIMPLPSV VEAWRPDWLL MVVMYWSIAL PHRYNILTAW  60
   61 VLGLALDILL GATLGVRSLA MSLVIYIAIL HCQRLRNFPK WQQTLVVALL IALYHLVVYW 120
  121 VEFVTDEATF NADLFLPAIS GLVIWPWIFW ILRRVRRHYK VR

Type	Start	End	Confidence
Cytoplasmic	1	9	0.83
Transmembrane Helix	10	31	0.91
Non-Cytoplasmic	32	55	0.82
Transmembrane Helix	56	89	0.70
Cytoplasmic	90	100	0.87
Transmembrane Helix	101	121	0.89
Non-Cytoplasmic	122	133	0.74
Transmembrane Helix	134	152	0.95
Cytoplasmic	153	162	0.95