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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77811658, gi|...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDVFKCVND EVDMTTKTTK KTPAQRKAKR SRGLFGHIWS LTWKLTLVVL AVVTFYSIYL  60
   61 DQIIAKKFEG QKWHLPAQVF SRSMALYPGA AVSHPQLMAE LKLLGYRKVA NPRQVGEFSA 120
  121 SSTRIELWRR PFLHPEGDQA EQRVMISFDS DGVSSVARIE DKRQLAVFHL EPVLLDRIIA 180
  181 GDGEDRLFVP TEDMPKLIIQ ALLLVEDRSF YEHHGVNPFA ILRAAFVNLS AGRTVQGGST 240
  241 LTQQLAKNFF LSSERSLLRK VREALMAVII DFRYSKEEIL EAYLNEVYMG QDKSRAIHGM 300
  301 GLASQFYFGR PISELTAPQQ AFLVAAIKGP SYYNPWKYPD RSQERRDLVL RLLMDAGELN 360
  361 TEQYKAAVES PLGLRSQNKP VHQKLPAFYA LVKQELNQRY GDALLKQSGV KIYTTLDPMA 420
  421 QEAAENAVMK TFKSLDKGNK SLQIGMVVTD KYTGGIAAMV GDKTPGFDGF NRAVEIRRPI 480
  481 GSLIKPFVYA TALAPNSKFT LATPLKDQPI TLKNEQGKTW SPQNFDKKFS GQVSLLTALK 540
  541 KSMNVPTVNL GIAVGVDAVA TTLAKSGWEE PLNEYPSMLL GAVNGSPLMV AQVYQTLADN 600
  601 GAYRKLTTVT AVLDSHNEPL PVTRSPKEQA ITPETDFLVQ YAMQQVVRSG TATRLGNAFP 660
  661 GVALAGKTGT SNDSRDSWFA GFDERNVAAI WVGRDDNGKT SLYGSSGAMA VYQSFLSERP 720
  721 PIGLRSIPVP GVVRGYFDRD TGVAKEAGCG NVEALPALKG TYNPAQNCGE PLQWWQKIF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle