YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68516433, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTLSNWLV LVGLAFFISA CSKAPEVVSL SGSTMGTTYH IKVVPSDALP QSQLLQAEID  60
   61 LALERVNDQM STYRPTSELS RFNQLPLEQG VEVSDDTIKV VREGIRLNEL TDGALDITLG 120
  121 PLVNIWGFGP DKRPTKSPTE AEIADAKTRT GIQNISIEGN RLFKRNAHLY VDLSSIAKGY 180
  181 GVDVIADLLD KYHTSGYLVE IGGELRIKGT KGDGSSWRVA VEKPQAEGRA VSQVIEPGDM 240
  241 GMATSGDYRN YFEENGKRFS HLIDPRTGYP IEHTLASVTV LHPSCMTADG LATAMMVLGT 300
  301 EASLILAKQQ GLAIMLIEKQ GEEFVVHYSD AFLPFVKSTQ E

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	341	0.99