YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68546018, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFLKKFAPL GRFAAGRARV CLLLLSSCNQ SVEWISHTME ITELLAFSVK HKASDLHLSA  60
   61 GVPPMIRVDG EVRKINLPAL DHAGVHSLVY DIMNDKQRKD YEEHLEIDFS FEVPNLARFR 120
  121 VNAFNQSRGA AAVFRTIPSE ILSLEQLGAP DIFKKIASFP RGLVLVTGPT GSGKSTTLAA 180
  181 MIDYVNENRH DHILTIEDPI EFVHQNKQCL INQREVHRHT HSFNAALRSA LREDPDVILV 240
  241 GEMRDLETIR LAMTAAETGH LVFGTLHTTS AAKTIDRVVD VFPAGEKDMV RTMLSESLQA 300
  301 VISQTLIKKI GGGRVAAHEI MMGTPAIRNL IREDKVAQMY SAIQTGMAHG MQTLEQCLQN 360
  361 LVNRGLITRE DAMAKSSNKQ ANF

Type	Start	End	Confidence
Signal Peptide	1	30	0.95
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	383	0.99