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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119767918, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVMGQLGQI KKMKPANLQG LGTPALVLAA LAMIVLPMPA FLLDILFSFN IALALVVLLV  60
   61 AIYTNRPLDF AAFPTVLLVA TLLRLALNVA STRVVLLEGH NGADAAGKVI EAFGSVVIGG 120
  121 NYAVGLVVFL ILIIINFAVV TKGAGRISEV SARFTLDAMP GKQMAIDADL NAGLINQEQA 180
  181 RTRRAEVTKE ADFYGAMDGA SKFVKGDAIA GIMILVINIL GGFVIGMVQH DLAFMDAVEI 240
  241 YTLLTIGDGL VAQIPGLLLS IAAALMVTRQ NEEGDMGGMV MSQMFDNPKS LAIAAGVLFI 300
  301 MGIVPGMPHL AFLTFAVATG AGAYFLHKRI EKRKQQALEA AASGSVEKLD NSPKELGWDD 360
  361 VRHVDTIGLE VGYRLIPLVD KGQGGELLSR IKGVRKKLSQ ELGFLVPAVH IRDNLDLAPS 420
  421 TYRISLMGVV VGEAEIRHDC ELAINPGQVF GQLDGVTTRD PAFGLEAVWI APELREHAQT 480
  481 LGYTVVDAAT VVATHISQTL SNNASKLLGY EEVQQLLDIL AKHSPKLVDG FIPDVMSLGT 540
  541 VVKVMQNLLN EGVSVRDLRT IVQTLLEYGT KSGDTEVLTA AVRIALKRMI VQEIAGPEAE 600
  601 IPVITLAPEL EQMLHQSMQA SGGDGPNIEP GLAERMQQSL ADAAQRQEMV GQPAILLTSG 660
  661 MLRSTLSRFV KYTIPNLRVI SYQEIPDEKQ IRIVSAVGQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle