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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68516592, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTFNKLFIA MGLGSMILLT GCNDSDNDAV TTPPTDTSLQ AFAPDGKLSV NIRRTSYGVP  60
   61 HIKADNLESL GFGNGYVQAQ DNLCILADGF IKANSERSLY FGPHASLDFT TGMPKSEDNG 120
  121 NLISDFAYKA LKVRVLAEAK WPSFSDNSRA LISGFVAGYN QYLSDVAEGK EQAEPFCAGQ 180
  181 PWVKPIVPED VVTYLFSIAL LPGAANFLDL IFYANPGDGT EYLPRIVGPA AVTASAKSAS 240
  241 ASAATRAFAD DVNQRLIARA ARIQTPDTNP RDLGSNGWGL GKDKTENGRG MVLGNPHFPH 300
  301 TGNLRFWQSH ATIPGHLDVM GGSLVGMPGP INIGFNENLA WTHTFSTAEH FIVYQLELKS 360
  361 GDRMQYLVDG QAKDIHEETV QVLVNAGPAG ILVAEKEVYY TDDAVMIEAP ANLAPFGWDD 420
  421 GQAFMLKDAN MANMDPVDHW LAMNLATNKD EFQQAFKDYD GVIFNNTMYA DKEGNAFYID 480
  481 DSTVPGLSDA AVMLLRTEQA IRDGRAQAGF TILPGNTSLF AFDGPMPYDR APKLERSDFV 540
  541 QNSNNSFWST NLASPLEFFS PMYGPERGRL TLRTRMGLKL MGEAGGTDGK FNLDELEAAV 600
  601 LGNHSYLAEM VLPELLAQCD AQGSTPVMLA EGVSKDISAA CDALSRWNGK QDNDSIGGAL 660
  661 LREFAHNFSE DTMLTVPFDF TAAASTPNTL TTDGSALKAL ALAALNLENA GFAVDAPLGN 720
  721 VQFVERSLPN GLPSGQRLPW PGSHNAEGGF NVFSTSTSGD DTLIPQHSYA PSLDVLSGKP 780
  781 LRSGLTDKGY QIRYGSSWMM AVNFTDTGVD ARGILTYSET SNILRPEFAD QTLLYSTQKR 840
  841 FRPFLFAEAD IAADVKETLE LSGDSIR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle