YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68545228, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLDLSEFND IDFENIGGWP AQVKVVFAIL LAVIVGVASY FLFISDAIDG LKREQDKEVQ  60
   61 LRQDFQSKYQ LAANLKLYRE QLKEMEAQFA ELLKMLPSEN EMDGLLDDVT FVATDSGLHI 120
  121 ESLDWEGAVQ RDFYIEFPIK MVVSGDYHQM GSMVSGVAKL PRIVSLHDFV IKHQDGDILT 180
  181 MDILAKTYRF KEGAELPPEK DANKAKGGKK

Type	Start	End	Confidence
Non-Cytoplasmic	1	22	0.72
Transmembrane Helix	23	44	0.92
Cytoplasmic	45	210	0.74