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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68545225, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWLKRILIA LFSLALLGVG AIIAAYFYVL PDLPDVTTLK TVQLQTPLKI YSQDGKLISQ  60
   61 YGEKRRIPMK LEDVPKPLLQ AFLATEDARF YEHQGIDPIG IIRAAFVLAA TGEKKQGAST 120
  121 ITQQVARNFF LTRDKTIIRK VKEIFISFHI EELLTKDEIL ELYVNRIYLG QRAYGVGAAA 180
  181 QVYYGKDLKD LSLAELAVIA GLPKAPSTLN PITSPERAMS RRNIVLMRMR EVGYINDSEY 240
  241 QLAISEPNTA SYHGAEIDLY VPYVSEMARD YMIQKYGEEE AYTGGYSVYT TVDSELQLKA 300
  301 QKALRNNIYA YDERHGYRGA AQVLWKDEAP ATDTIVSTLK KVASVQELEP AAVINVQEQQ 360
  361 ATVLRNNGET VTLPWQGIQW ARKFISDTRQ GAAPKTATDV LTAGERVWIR HNGEDWQLSQ 420
  421 VPEVSSAIVS LDPHNGAIRA LVGGYSFSQS QFNRVTQAKR QLGSNIKPFI YAATLEKGYT 480
  481 LATLINNAPI NKPDLSQGTA WRPKNSPDTY TGPTRLRVGL AQSINVMAVR ALRYSGIDAT 540
  541 VELLTRFGFD PNDLPRNESL ALGSPSVTPL QVVRAFTVFA NGGYLVEPFF IDRVESATGN 600
  601 LVEKTQPALA CEAPIPEEVS EDMATTEASA PPAMLNAATP ADPSSQCGDP AARYANRVIS 660
  661 EQNAFLITEA LKSVIWGGGD FSKGTGWNGT AWRAARLLKR HDIAGKTGTT NESRDTWFSG 720
  721 FNPDLVTTVW VGFDDHGREL GRTAWNANGA KDQISGAEAG AKTAGPAWNE FMFMALADTP 780
  781 EKPMPVPAGI VSARIDYSSG KLSRRTDYTS GFEYFAAGTV PTDYANSAIA EDDTTAPETT 840
  841 ADDLFQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle