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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68544994, gi|...
Protein type: Transmembrane
Type Confidence: 0.54
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLTRTSTEA RQAEKPSLGM NRRQFLKSAG FATGGIAAAS MLGTGMMRRA EAKDVPHNAP  60
   61 TEVKRTICSH CSVGCGIYAE VQNGVWTGQE PAFDHPFNQG GHCAKGASLR EHGHGEKRLK 120
  121 YPMKLEGGKW KKLSWDQAIN EIGDKMLSIR EQSGPDSVYF MGSAKFSNEQ SYLYRKLAAM 180
  181 WGTNNVDHSA RICHSTTVAG VANTWGYGAQ TNSFNDMRNS KCMMFIGSNP TEAHPVAMQH 240
  241 VLTGKERGAK IIVVDPRFTR TAAKSDEYVH IRPGTDIPFI YGLLWHIFEN SWHDEAFIKS 300
  301 RVYGMERIQD EVKRWTPEEV ENVVGVSKAQ MYRVAKMMAE HKPGTIVWCM GGTQHHVGNA 360
  361 NTRAYCILQL ALGNMGVSGG GTNIFRGHDN VQGATDFGLL FDNLPGYYGL TSGAWAHWSN 420
  421 VWDLDPAWVS GRFDQGEYLG KQPQTTAGIP CSRWHDGVLE DKTKIAQKDN IRLAFFWGQS 480
  481 VNTETRGREV REALNKMDTV VVVDPFPTMA GVMHQRTDGV YLLPAATQFE TYGSVTASNR 540
  541 SLQWRDKVIE PLFESLPDHV IMYKLAKKWG VEKEFCKHIQ VNGDEPLVED VTREFNRGMW 600
  601 TIGYTGQSPE RLKMHQQNWG TFDVNSLEAP GGPAKGETYG LPWPCWGTAE MKHPGTQILY 660
  661 RTDREVRFGG GNFRARFGVE HEGNNLLAEG TYSKGAEIQD GYPEFTADML KQLGWWDDLT 720
  721 EEEKKYAEGK NWKTDVSGGI QRVAIKHGCI PYGNAKARCI VWNFPDDIPL HREPLYTPRR 780
  781 DLVAKYPTYD DRMVHRLPTL YKSIQEKDFS KDFPLALTSG RLVEYEGGGE ETRSNPWLAE 840
  841 LQQEMFIEIN PGDAADRGIR DGDDVKVHGP EGAVITVKAM VTPRVIAGEC FMPYHFAGIF 900
  901 EGESLVKNYP EGTVPYVQGE SANTVLTYGY DPVTQMQETK SSLCQITKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle