YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77812854, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.53
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTGRVGSFT LALAIVILAI FSLRVLLIPE VSQPESITSQ LERAVTPVTQ IPDFSGINDI  60
   61 TEKKKAFFDF LRPIIQQQNA IIEEERDLIS DALTELENGG TLSSSQLTQL NMLCDKYQYA 120
  121 ARNIDIKSLN SLLKRVDIVP ESMVLIQAAN ESGWGSSRFA REGFNFFGEW CFSTGCGIVP 180
  181 SSRGSGKMHE VKVFSSVDAS VSSYMRNLNS NPAYALFRSI RADLRSQEVE PTANQLIYGL 240
  241 VNYSERQEAY IDELLDMLRH NEKYLVNADA

Type	Start	End	Confidence
Cytoplasmic	1	6	0.49
Transmembrane Helix	7	28	0.49
Non-Cytoplasmic	29	270	0.98