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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68544304, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNKKILAVM ITAALGVSAC NSDDDKVVQA DLRVLETTDL HTNIMDFNYY SGKDDPTIGL  60
   61 ARTASLIHAA RNEAKNSVLV DNGDLLQGSP MGDYMAKVGL QMGDVHPAYK AMNLLDYEVG 120
  121 NIGNHEFNYG LDFLNKSISG ADFPYINSNV YCADENGCWK EVKKGEHLFT PYIIKQKIII 180
  181 DSEGNNQTIN IGYIGFVPPQ ILLWDKQNLT GKVTVEDIVT TAKKYVPEMK AKGADIIIAI 240
  241 PHSGIGSTEN PGDPMAENAT YALTYVDGID AILFGHSHSI FPDAKYADLP NTDVTKGLLN 300
  301 GVPAVMPGRW GDNLGVVDFK LERRDDKWHV LSAKTQARPI YNGATKEELV SQDPAIKDAV 360
  361 AAEHQGTLAF VDEPIGVAAA DMYSFLTLVQ DDPTVQIVSD AQIANVKAKL PAALKGLPVL 420
  421 SASAPFKAGG RHGTTSDADQ FVQVDKGPLT FKNAADLYLY PNTMVAVKAT GAELKDWLEC 480
  481 SANQFNQIDP AKTTPQELIN WDGHPTYNFD VLDGLTYKID VTQPNKFDRD CAVVNANANR 540
  541 IVDLSYKDEN GKVITGEEFA AKEFIVASNN YRAFGGKFAG TGSDHVVLEL PDTNREALAA 600
  601 YITAQSQYNE TTGKYEGMVN PSADYNWDFK TITTNVTLDV RFQTQDSDKA AAFIEANKQR 660
  661 EMKKISKDEL GFAVYSINLT K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle