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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113906543, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRNIMLIPI GTGVGLTSLS LGMVRALERH GVKVQFFKPI SQLRPNDNGP ERSTTILSKS  60
   61 PTVNPLEPFD MAHAEALIRA DQTDVLMEQI IARASDCASN TETLIVEGLV PTRNHPFADD 120
  121 VNYAIAKAMD ADVIFIATPG SDTSTGLMNR LEIAYNSWGG KKNKRLIGAV INKIGAPVDD 180
  181 EGRARPDLSE VFDHQGVQRS DAASMFQMPG KSPLRILGSV PYNLDLVAPR ASDLAKHLSA 240
  241 RILNAGEMHT RRLRKVTFCA RSIPNMVTHI KTDSLLVTSG DRSDVIVSAC LAAMNGVKIG 300
  301 ALLLTGSYEP EPEILKLCEQ AFETGLPVFL IDSNTWQTSL NIQRFDHEVP VDDAVRIDLV 360
  361 QDYVASHIDQ TWIESVTKNS PREHRLSPPA FRYKLTELAR AAHKTVVLPE GDEPRTIKAA 420
  421 AICAERGIAR CVLLGKKDEI LRIAAQQDVV LGEGVIIIDP EEVRDRYVEP MLELRRSKGL 480
  481 TEVVAREQLE DNMVLGTMML AQNEVDGIVS GAVNTTANTI RPPLQLIKTA PGSSLVSSIF 540
  541 FMLMPDQVLV YGDCAINPDP NAEQLADIAI QSAESAKAFG IEPRVAMISY STGNSGTGSD 600
  601 VDKVREATRI AKEKRPDLII DGPLQYDAAV MPNVARSKAP DSPVAGQATV FVFPDLNTGN 660
  661 TTYKAVQRSA DLISIGPMLQ GMRKPVNDLS RGALVDDIVY TIALTAIQAA QNDAAKG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle