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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68518137, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELFGFALKN CAISASKSIK YWQRPPSFWQ SYKIILVSVT GNTAAAMNPV NNMTKYSLRS  60
   61 WVLVLALAPT ILVGILLGSY FTINRFYELE DTLVEQGSNI IEPLSIASEI GLVANDREAT 120
  121 KRLLAAAQLN KSTLVKSIAI FDANNQLFVT SHYHKDFEIM RYKEALNTLH KTEIEHVGDS 180
  181 LILRTPIFST GPSAAPANYD IQTDDGQLLG YISIINKERA LLEQHRAAVA AFIIVLIGVQ 240
  241 LNLLFTFRLV KNVTQPITEM VRVVAKIREG KLDARLDGNL IGELDLLKRG INAMAGSLSE 300
  301 YHDEMQQNID QATSDLRETL EQIEIQNVEL DLAKKRALEA SRIKSEFLAN MSHELRTPLN 360
  361 GVIGFARQLV KTPLHSSQVD YIKTIERSAT NLLGIINDIL DFSKLEAGKM VLENMPFGLR 420
  421 ETIGDTITLI SGSAQAKGLE LVVDIAPNVP DNVNGDAMRV CQIINNLVGN AIKFTDSGSV 480
  481 MVKIELQSQS EEQVVLRCDV VDTGIGIDES QQDFLFQAFG QADSSISRRF GGTGLGLVIT 540
  541 KRLVNQMGGQ IGFTSSPEKG SNFWFSLPLG LGQFQIGDSL PLEKLKDKTI LFYEPRVLTH 600
  601 AVLSRQLNQW DTKVTHHQHI PSLLTTLNTA EAPYDYVLLS CHGFSDAGQL VSTLNLAKTK 660
  661 TDCLVVLYDC QEQDALTQFI RPNADVVLSL PVSEHQLARN LLYPPMEYDI IAPVTIATPA 720
  721 ARQSLTVLAV DDNFANLKLI DTLLSELVTT VVAVNSGDEA VKQAKTRTFD LIFMDIQMPG 780
  781 TDGISATKQI RQGSMNRNTP IIAVTAHAIA EERELILGSG MDGYLPKPID EAALKDVIHR 840
  841 WITRPKFTHF DLHTLNWDLC LTQANHKADL ALDMLRMLLD SLPQTVTTIQ TALSQNDHPV 900
  901 MLSTIHKLHG ASCYCGVPTT QRLCQEIESA LKRETAVEDL EPEILELLDE LTKVESAANQ 960
  961 VISQLSAEIT DDQKNGLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle