YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68518156, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.62
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVISKGFTL VELMVTIAVA AILLAIGVPS LTSLYEGTRS TNEIRKISDV FAFARNQAVN  60
   61 YGATVTVCPY AASPCGTDWN KGFSVYIDNG GAKNVLKVID SFNEHDVISL SGPADKKVDF 120
  121 TPDGLVSVET SIIYCSNGKS DGSKSLKIST SGLIREGADG QSCT

Type	Start	End	Confidence
Cytoplasmic	1	7	0.47
Transmembrane Helix	8	31	0.53
Non-Cytoplasmic	32	164	0.85