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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125996510, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIKKLACST LLVLTFVSAY SFGDDTELYV KESTTRTGAR PKVLVIFDNS GSMSTEEITQ  60
   61 VVDYDPNYNY PAVSGSGYSD TLIYYAVGGG GLPTPDTSSD KRYFKASLNG CSQSKAALAE 120
  121 LGRFTGYIRE FTASGTTGIW KELPETNGTA ISVVDCWQDI SKTDPNNSSS YSNGFAANGL 180
  181 TTGSGKKKKA YPYFTSSSPG TSWADALAAA NNTDFGVGQP VTLYTDNYLR WYGLSKAGKL 240
  241 PTVKVSRLEI AKKAISNIIS STPTVDFGLA VFNYNYPNEG NRDGGRIVSG ITQMTDSTRA 300
  301 SLLTTIDNLL AKTNTPLCET MYEAYRYFAG KGVKYGHGDT DYGSYVGNNP PYDSLVEKGG 360
  361 SYESPFKVCT DIAYVIYVTD GTPTVDKNAN NDVISLTASG SKEGNYSSFS KNLDTASYLP 420
  421 ALASYMFNND LINKLDSSNT EQVQNVRTYT IGFSKGAEDA APLLAETAKR GGGLYFAAQN 480
  481 SLELQNALND ALSNILNIDS SFTSPSIASN NFDRTQTFDA AYYAMFLPGK GPRWSGNLKK 540
  541 LKVTADGTLV DSKGNAAIAD NGNIKDGACT IWSNCDAQKD GNKVEVGGVA AQIRTQSVRK 600
  601 IVSDLGAGSS LTPLTLANAQ SAAGGDTALA SYMRTSVDEL TNTFDWLKGI DVDDDNKDGS 660
  661 TTDKRNDVMG DPLHSKPLAL NFGSSTATDI RIMLGTNQGV LHMFKDAGES VSETWGFIPY 720
  721 ELLPNLTELR SNDPSGVHTV YGIDSSPVAY TETDATGKVI KAWVYVGMRR GGSSYYALNV 780
  781 TNPDSPTLMW SINPSTEGFS DLGQTWSEPI VTKIVGYEKP VLIFGGGYDT SFDATPSSSP 840
  841 AGRAVYIVDA EKGTLIHSFG GSTSGATVLS GIQDSIPNSV AVLDSNNDGY TDRIYATDVG 900
  901 GNVWRMDLPS ASQSSWTAFK FAALGGSNND NRRFFAEPVV AQTMFTNIAE VKVTTGTGTT 960
  961 TTKTYQNVPY DAVVIGSGAR PHPSSTAVND MFFTLQDRNV VTKSFTGSDI PSVITINDLY1020
 1021 DVSSSAPVSE TDNISFGKKL GWFYDFSGLG EKSLTAALIV QGKVYFTSYS PPADSVAENV1080
 1081 CVVSGSGKLY VFDLHKGTRT FSQLYFELGE RVPDTPQIVI PAPETGKDPY IYIIGVGKGE1140
 1141 KNKDGEYSGT INVASGLGVN KIYYHINE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle