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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: C163A_MOUSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.67
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGHRMVLLG GAGSPGCKRF VHLGFFVVAV SSLLSASAVT NAPGEMKKEL RLAGGENNCS  60
   61 GRVELKIHDK WGTVCSNGWS MNEVSVVCQQ LGCPTSIKAL GWANSSAGSG YIWMDKVSCT 120
  121 GNESALWDCK HDGWGKHNCT HEKDAGVTCS DGSNLEMRLV NSAGHRCLGR VEIKFQGKWG 180
  181 TVCDDNFSKD HASVICKQLG CGSAISFSGS AKLGAGSGPI WLDDLACNGN ESALWDCKHR 240
  241 GWGKHNCDHA EDVGVICLEG ADLSLRLVDG VSRCSGRLEV RFQGEWGTVC DDNWDLRDAS 300
  301 VVCKQLGCPT AISAIGRVNA SEGSGQIWLD NISCEGHEAT LWECKHQEWG KHYCHHREDA 360
  361 GVTCSDGADL ELRLVGGGSR CAGIVEVEIQ KLTGKMCSRG WTLADADVVC RQLGCGSALQ 420
  421 TQAKIYSKTG ATNTWLFPGS CNGNETTFWQ CKNWQWGGLS CDNFEEAKVT CSGHREPRLV 480
  481 GGEIPCSGRV EVKHGDVWGS VCDFDLSLEA ASVVCRELQC GTVVSILGGA HFGEGSGQIW 540
  541 GEEFQCSGDE SHLSLCSVAP PLDRTCTHSR DVSVVCSRYI DIRLAGGESS CEGRVELKTL 600
  601 GAWGPLCSSH WDMEDAHVLC QQLKCGVAQS IPEGAHFGKG AGQVWSHMFH CTGTEEHIGD 660
  661 CLMTALGAPT CSEGQVASVI CSGNQSQTLL PCSSLSPVQT TSSTIPKESE VPCIASGQLR 720
  721 LVGGGGRCAG RVEVYHEGSW GTVCDDNWDM TDANVVCKQL DCGVAINATG SAYFGEGAGA 780
  781 IWLDEVICTG KESHIWQCHS HGWGRHNCRH KEDAGVICSE FMSLRLTNEA HKESCTGRLE 840
  841 VFYNGTWGSI GSSNMSPTTV GVVCRQLGCA DNGTVKPIPS DKTPSRPMWV DRVQCPKGVD 900
  901 TLWQCPSSPW KQRQASPSSQ ESWIICDNKI RLQEGHTDCS GRVEIWHKGF WGTVCDDSWD 960
  961 LNDAKVVCKQ LGCGQAVKAL KEAAFGPGTG PIWLNEIKCR GNESSLWDCP AKPWSHSDCG1020
 1021 HKEDASIQCL PKMTSESHHG TGHPTLTALL VCGAILLVLL IVFLLWTLKR RQIQRLTVSS1080
 1081 RGEVLIHQVQ YQEMDSKADD LDLLKSSGVI QRHTEKENDN L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle