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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|217496762, gi...
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRQAKIKRV SKPQKPQLIH WRLYVVVGFV CTLFCSLVGR AAYIQIIEPD KLRHESDMRT  60
   61 LRTTSREVQR GLITDRNGDM LAVSVPVRAV WADPKQVNDN NGFADMRRWQ ALADVLHEPV 120
  121 EDILDRVRSN PTKRFTYLKR QITPAVADYI TQLKLPGVFL KSESRRYYPG GEITAQLIGI 180
  181 TNIDDVGIEG VENAYNSWLT GTPSKQKVRK SRDGHVVERL DIIQEGESPN DLVLSIDQRI 240
  241 QQLAYRELKR TTEMNQATSG SIVVLDIHTG EVLAMVNTPS YNPNARDNLQ TFRMRNRAMT 300
  301 DTFEPGSTIK PFVVAAALEA GTVKSTDIIA TSPGWMRLGG RQVRDPANYG DMSLARILAK 360
  361 SSNVGISKLA LSIPVQQLLG TYQSMGLGSF SGINLTGESA GVIQDRHRWS DFERATLSFG 420
  421 YGLTATTLQL ARMYATLGNG GTLFPVSIMK LKKPPVGERV ISEDVAHDVM QMLVGVTEKG 480
  481 GTGTLAHIDG YPVAGKSGTS RKAVAGGYGD DYVALFAGVA PANNPKLAIV VVVNEPKGDL 540
  541 YYGGSVAGPA FAKVMSGALQ MLNVEPITDK EQVQLAGIAA GRAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle