YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|160875321, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTGRIGSFT LALAMVIVAI FALRVWIIPN TNDSSAIATQ LVDAVDPVTQ VPDFSAINDI  60
   61 TEKKKAFFDF LRPIVQQQNA IISIEREFVS EMLALVENGK SLSETQLGQL NTLFDKYQYA 120
  121 ARNVDAKSLA SLLKRVDIVP ESMVLIQAAN ESGWGSSRFA REGFNFFGEW CFTAGCGIVP 180
  181 SSRGSGKSHE VKVFSSVDES VSSYMRNLNS NTAYALFRSI RADLRSQELE PTADQLIYGL 240
  241 VNYSERQEAY IDELLDMLRH NEKYLVNVDV

Type	Start	End	Confidence
Signal Peptide	1	22	0.52
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	270	0.96