YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60476835
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTNGSSLC RLGLVMTLAG VISFSIVFYM FPPSRNCPPQ FVIHEQQSES SSDKSNNSVS  60
   61 NAAEDKPILL LWVWPENYRF EFSDCKKFYN IDNCKLTDDR SLYTNSDAVM VYHRGISWDL 120
  121 SNLPPSPRPP FQKWIWLHLE SPTNTKKIPG LENLFNLTLS YRQDADIAVR MRLKTRKKPA 180
  181 EDFVVPKKDK LVCWIVSNND PSTGVSARNK YYQELSKHIK VTLFGRAYSW FLSYDEYYPT 240
  241 LSSCKFYLSF ENSIHKDYIT EKINGPLAAG TVPVVLGPPR KNYENFVPGD AFIHVEDFQD 300
  301 PKSLAEYLHL LDRDDVAYRR YFNWRKHLTP TPHLILQTQE FVLAICTACD YIARHRDYKE 360
  361 AHDIYDWYFN

Type	Start	End	Confidence
Cytoplasmic	1	8	0.94
Transmembrane Helix	9	31	0.90
Non-Cytoplasmic	32	370	0.99