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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68542254, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEPIQLNAA ALHSAAQALD PLTLPFGGSR LIEASAGTGK TYTISGLYLR LLLGDGIAAP  60
   61 LTCEQILVVT FTNAATEELR DRIRRRIQVA FKCFLGLTIA DPFVQALYDN TPESERAIAL 120
  121 RRFDLALKSL DEAAIFTIHG FCQRILSDLA FESSLLFESD FTLDDSEFLH HAVRDFWREA 180
  181 CYPLPDYLAQ IIAKEFGEPD GLVKQLRPLL GASQAKPLKP ALKFDALALS LRQSLERFKL 240
  241 AWPRGRDGLL ALLHGLPLNG TRFGKATDKY PKLAAMFDAL DNWLAFGHGL PPLKELEALS 300
  301 LSELKLNKGG VIPSVSEAPL MDHMEQLATL ITAIKPAFLY SAKLGISERF AQQKQQKNVL 360
  361 TPDDLLTTLA SALHANNETL PKAVATRFPV ALIDEFQDTD PLQFAIFSGI YQGRYSFEKQ 420
  421 NADATENKLS LLMIGDPKQA IYAFRGADIH TYIEARNHTQ AHYHLDTNYR SSANMVAGVN 480
  481 HLFSQHHDPF ISQSIPFDSV KTPSSAKVKT LTEKTANPAA LRLRLLSESA ENGLNKTTAR 540
  541 HLLAEDAAAE ITRLLTDAAN GACHSPKGPL IAKDIAILVR DRNEAAVMKT ALSKRHIGAV 600
  601 FLSRDSVFDT LEAREMALIL RSLANPKDER ALRSALATAL LGYSAEQIHA FNQDEEHRQL 660
  661 LLEQFFNLHQ VWQKRGIMPA LLSLANSTKL IDRLLHTAST QTDAQEQDAT NGERRLTDFR 720
  721 HLAELLQQKA TELDGISALL NWYEQQLIDN TGTDEQQLRL ESEQNLVQIV TIHKSKGLEY 780
  781 PVCFVPFVSL ARDNRRRPTP MLYHRTNDAG EQELVWDIEG TDEGWERAKQ ETLAEDLRLL 840
  841 YVALTRPVYL CYLYIANHSR QLKNGLKSQL HETAIGYLLG IGDSECDFAR ICNAAQQLAQ 900
  901 DVEAISIDKV PDDIDERPLP SSQDIAQILS AKTLTRQYCT PWRVGSYSGL VKNTSHGKAA 960
  961 PGADDEALGT LEYMAAHTLS IPDDPSHEQQ DGMLNRFNFE RGANAGSFMH LVLEEIDFTQ1020
 1021 ADRDLPQQLP KAMLKYGIAP EWQTVLHTWY LDVLHAPLGL MPTTVSSTTV PTTMPSTSAL1080
 1081 ENNSRTPKPE HPDLCLAKLS PQDTLVEMEF YLPLSELKDT ELNALLQQFG YESTLKFDDL1140
 1141 KGMLKGFIDL TFEYQGKYYI ADYKSNHLGD NINAYHQSAL QSAITDHRYD LQYILYSLAL1200
 1201 HRYLSLRLPS YDYDSHIGGC YYLFLRGMSA QYPGYGIYYD KPPKALILAL DLLFNDNLFH1260
 1261 SRLAGAIDTG VTA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle