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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125997699, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLIQSNQM EVLCAHLAAY LTQRLAFARL LSNEHILVQS PGMSTWLRLE IAKQNGIAAA  60
   61 LEFPLPSSFT WQLCHDLLPD VPKDNAFTKA AMTWKLMQLL PRMLQDDTFG PLRHYLGNTL 120
  121 ENTPTTNTAD TSEHFNISDM TADDIKLYQL CGRIADIFDQ YLVYRPDWIL AWEQNEHPES 180
  181 LTKSLNEDQR WQPILWRALI AFNRDELNQS HYHRANLHSD LIAALNNPDT SLAKLPQRLF 240
  241 VFGISSMAPQ TLEVLYHLAG RIDVIVLGLS PCQHYWGDIV DPRNRARMAV QYAGKRQLAE 300
  301 LWEDKLEVGN PLLANNGKMG RELLDMLLEL PAEHCDFGDD VYCEPCDDPN SPHSHASMLH 360
  361 GVQYDILEMQ TLDRVLGPDA ELYQNVKNRR LLKRDDESIR VKSCHSPLRE VETLHDHLLE 420
  421 LLSNDVDLTP KDIVVMMPDV AAYAPYIDAV FSAKQDLHYI PYAIADRGAA QESPLINSFL 480
  481 NLLGINQSRF GLTDILSILE VPAILRRFQL DDDELQLIRR WLDEAGVRWG RDEQSRLKQG 540
  541 VPAFEQNSWA FGIKRLILGY ALSDDAPLYQ DHLIVTGIEG QSAQALGKLL NFIEVLDETA 600
  601 QILALPQVGA LRLAELTDLL DAFYDTDEDE REQLQEIRDA IAALEQELLS AGKPLDTNSL 660
  661 DTSMFEKLAQ QSISGLSLSI EVLQQWFNQR LTESRVGQRY LAGSVNFCTL MPMRSIPFKV 720
  721 VCLLGMNDGV YPRVQHPVGF DLMAHFGARK GDRSRRLDDR YLFLEALLSA REQLYISYIG 780
  781 RSERDNSERI ASMLVSELIE YCQLCYLPET LLAQSQKVSS PIDPEDAEKA LYKAIVSHQP 840
  841 LQPFDPKLYQ AAVKSDDEDG SSIGQSYSQQ WCPPNAAAAG THAGRFIGAQ TRILLEADEQ 900
  901 DSMLQAVPLP TPQQQSKQVD VSALIRFFRN PAQYFFNRTL KVDLSLNIQA DDNDEPFSLN 960
  961 ALERYMLQAQ LLDDAISQGL TEPDIELIKR LKASGSLPMQ PFDDLLLRQY QHDIKPLIGR1020
 1021 TLFLKGEQAS SHADIKLLFD LPITAGKSQQ VLLQGRIDDI SPKGLVNYRP GSAHGRDVLR1080
 1081 LYLRHLCLMA MGHTHASYLL DMGHFHALAP ITAERAHALL ADLLVLFYQG QQYPLCFMPR1140
 1141 TSLAYVSCEG EHDERLQQAL PEWLDEQSQL GEGSEPHYQR LFSFPRDFSE GSFGAFAERI1200
 1201 CRPMVSLYLK DTLAQLEEFA LNDGMSQGQT PNVQATETQA TETRATAAHL NRDSAQGEQA1260
 1261 

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