YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68520313, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTNALFKGH IQARQLGFTL IELVIGMLVI GIAIVMLTSM LFPQADRAAS TLHRVRSAEL  60
   61 AHSVMNEIWG KRYDQNTNAN GGTPACDSPL GSNCSTSLGP EVGESRNSFN DVDDYNGLNE 120
  121 TATMLNSTQT YAAAYPNYQL SVTVAYGPAP NTKLVTINVT TPDNEVITYN LVRSNY

Type	Start	End	Confidence
Cytoplasmic	1	15	0.76
Transmembrane Helix	16	42	0.83
Non-Cytoplasmic	43	176	0.78