YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68520312, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSFSAKRMQ TSKRGFTLVE MVTVILILGI LVVGVSSFII FGTRIFVESS SVDQVLSQSR  60
   61 FAVERMTREL RSALPNSVRV NTDSLTYQCI EFVPIEASTT YLTMPIIPDA AASTGIVILD 120
  121 NTASAIRVNQ FAWIYPLVDA DVYSSARQKR AQVKTIAISG NQVTLTFTAP TRFAEASPRQ 180
  181 RIYLGSSPVS YCFEKGTSGN DLQIVRYAGY NFNGVQPNPA TMGTGVLMAQ GVANRLDNSN 240
  241 DLPLILTPSS LVNNAMVHLQ PRFNVNGETF QYRHQVQVIN VP

Type	Start	End	Confidence
Cytoplasmic	1	20	0.89
Transmembrane Helix	21	42	0.95
Non-Cytoplasmic	43	282	0.97