YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125996401, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKPLVIAM AIALSSTALS FTLAAEENVK PVVQGDADKK LVTTEFDEVL VSATRISEKA  60
   61 SETSRSVAVV GEEQLAVAQA SSVANALKNE ANITLTNGPR ASSQGVEIRG LSGSRVLQTI 120
  121 DGARQNTGSG HRATYFMDPE LLKSIEVLRG PASSLWGSGA LGGVVAQNTK SAQDFLAPNE 180
  181 TFGGYFKQGY ETNGSRTKTS GAIYGQQDSI DWLLNGSYTD SNNIKTGNDE TLSNSSSNGS 240
  241 SGLVKFGWQA DEASRLELSA RVNKINELVP SNPSAAASNS VPLVRRKTDD QNITLDYSFN 300
  301 PANNPYLDTK MQVYWNSTDY DEDRITKGQL DSTEYRTVGI NLNNSSRLGN TLLTYGVDGF 360
  361 RDTIETTRDD SGQVGQRPGN IDGETTVWGA FTRADIELTQ TLNLDAGLRY DSFKNDSNNL 420
  421 NLSSDDNELS PSLGLVWQTQ SWLTLSARYD QAFRAPSVEE MYSSGTHYCI PPIPGFLPQG 480
  481 LCNTFATNPD LKSEKARNKE IKADLRFSEL AGDDELALTF NIFRNDVDDF IVQQVSNPWH 540
  541 GIPGFEQTTS WNNVEDARLT GFEISGRYRI GQTRLAMNYG QTHGEDRKNG GDIEGIPANK 600
  601 FNVDLSQGIM EGDMKLGTRV TYVATQSNTP DDFKVAKYDD YTLWDVYVAW EPTMGAMAGV 660
  661 RVDFAIENIG DEKYQQAWQT LYQPGRNMKL SARYMF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle