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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68520688, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.14
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKDEFSKSH SPSNNIYFSV LSSSWLMIVA ALLFMGISWY VLEQYLRDRG EERFENSVQE  60
   61 LTEAVNRRML AYEQVLRGGV GLLLSSNSVT RKEWQTYVVN AHLSEYYPGF QGFGYAQLLK 120
  121 PDTLDTHVQQ VQAEGFKDYK VYPEGVRDQY CVILYLEPFD WRNQRAFGYD MCSESNRRKA 180
  181 IEHAITTGQP TVSGKVALVQ DTPEDAKAGF LMYLPIYQGI VATEAERKQQ AIGLVYAAFR 240
  241 MDYLMQGIMG DRFSGLKLAI YESPQASADS LMFTSSKVLP NQKDVFYQSQ TDLIGGKQWR 300
  301 LDISSQSRFI SRSEETQGIW LQFIGCAFIL ALFYSVLIMA RNRYKESLLT SELIANEKRF 360
  361 RLVIEASPSA LFMVDKAGVI TLVNTHAERL FGYARDELLG RSINMLLPDA LRDAHQQHMN 420
  421 NYLVQPIAKN MSMRDDLFGC CKDGSRLAIE VGLTPIHFSN GIFILATINN VSERKRIEVQ 480
  481 RAEHMQELER INQELDRFAY IASHDLKSPL RGIEQLTSWL AEDLSDNTNE NVQKYLGLIQ 540
  541 SRIHRMVLLL DGLLMFSRIG RVDTETTEVN SRQLAEDMFA LVAPPQGFEL VLKGEFPNFH 600
  601 TVRALLELVI RNLISNAIKH HDLGTGVITV LFEAADKHYL FSVIDDGPGI SSAYQNKVFE 660
  661 MFQTLKPRDE VEGSGLGLSL VKKTVESLGG NIQLKSQGRG CCFYFTWPKK IVKKELL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle