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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91713904, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSTEPDLQL KSPIQRNYNR AVFYTYIGVI VMALLSAWVL FDRQKVQLIE QREEQVARHV  60
   61 LQIDLLLESS IRAVKSLRNV AVDHLRLGEL ARKDMLPEYE KFNQDGQFFT LEPSYANGGE 120
  121 PFTNMGRITG SGSLKNRSDK FYQELEMLFE LSLSFPVAKE AAPKASSIYY ISNQRIMSSY 180
  181 PWSANEQGFR EELLNKNQFR LATPEMNPQR SVFWSQAYVD VSEQGLLTTL GLPVYLENEF 240
  241 IGSINLDMTL SSLAKQIRMY FKMPGTVILL DQQNNILSHS DFDSTEMNRV YHISQRIPSE 300
  301 LHSLAESEIF DAHEGVLRNG YYIHSVALHN APWRLLYLQE ESALFQDAWD KLQLTFLLVV 360
  361 LALSVLVTIV HWQTRRAFVS PASRLLTHLE VCSQSPIKPP HKITSGWEPW FQLVSRIFEE 420
  421 NKQYTLHLAE QNKRLDNLVA KRTQRLRETT ERREREYALL RSLIDSIPEA IVFKDQEGKY 480
  481 LGCNKSAEHM LGYSESEMIG MTSVELTSPE QGARIRLEDS QVLKDRAALR YQEKVDISGK 540
  541 SVLLDILKLP FYNRRGELLG LISVWRDVTR EYQSAEQLRL SEERYHLAMD AVEDGLWDWY 600
  601 LDSEQIICNP SYYSMLGYET NEFPALISSI EELIHPDDRD RVKTYRDLYL SEPSGAYETE 660
  661 FRMRTKSGRY LWVLSRGRVV EFTADGMPSR MLGTHKDITR QKSNEVALLE AKHDAELANM 720
  721 YKSEFLANMS HEIRTPMNAI IGMLQLASRT QLTLQQQDYL NKAGFSAESL LRIINDILDF 780
  781 SKIEAGKLEL ESVPFSLEKV LDHVIDMNAL SAQEKGVELL LFSPLTTGLT LKGDPLRLGQ 840
  841 VLVNLLSNAV KFTQDGEIEL GCEDVGERDT QISLKFWVRD TGIGISREQQ ANLFDAFSQA 900
  901 DGSTTRQYGG TGLGLSISKH LVSMMGGNLS VESEPQQGST FSFTLSFDIA KELPQQPLVV 960
  961 PKQLNNLTSL VVDDNPSALQ IYSTLLRDFS FGVNTATGGA EAIERLLQQD IDLLLLDWMM1020
 1021 PVVSGGMVIK AVDEMIADGR LKKRPVIIIM TAYSTEPLNL ELDKYEYQAV LQKPFKASSL1080
 1081 FDEIIGAFAA PAKIKQEIAE QVEPQPLQSG LILLVEDNFI NQQVASELLK SAGYDVVIAD1140
 1141 NGQIALDLVA KQEFDAVLMD IQMPVMDGLT AAKILRETYS TQQLPIIAMT AHAMSGDKEK1200
 1201 SLNAGMNAHI TKPIVLTELF ETLAYWIALK NQG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle