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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91794067, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTRICGFSV FFAVLMGAAT SHADDTELYV FESSSRSGAR PQVMIIFDNS GSMRTVEPDA  60
   61 TAFYDPNVIY PAVGSGNALQ ERMVYFTKGG IDNTAMPVPD SPSESRRFLS DINGCETSWN 120
  121 YLNTYGVFTG FFREYSFSGQ NGTWQEVPDN NGANVTVIDC FDDIEAKKWK NAPGQPTGFP 180
  181 VDSAGNKQNP IRYTPISASS TQAQIDAAII KAKQTGFGTG KALTLYTDNY LRWYHGDQAN 240
  241 VPKSRLDIAK EVIKNTIVTT PSVDFGLTVF NINAFSEGDA DGGRIVSGIK TMTEANKLAL 300
  301 LNTVAGLDPE TNTPLCETLY EVQQYFGGKT LTFGNKDKKP SGYSYTPNTP PRDTSIEQSG 360
  361 KYISPFKECQ NLAYVVYITD GVPTLDQNAN NLVKALPNAD QTAYKNTNPN FSSYLPNLAQ 420
  421 WMNNNDVNAN LVGEQKVKTF TIGFSDGAAD AAPLLIKTAE LGGGKYFAAK GAAQLQAALQ 480
  481 QVFTDILEVN ASFTSPSIAS NNFDRTETFD SVYYAMFLPN RGPRWSGNLK KFKVTSGGKI 540
  541 IDSKSVEAIG SDGNIKSSAC SFWTSSAICA SSSDGGDGND VTIGGTAEAL RQTANRKILS 600
  601 NLSGGLVSLT KSAAATVAGG NANLATYIGV DETSLDAHFD WLKGADVDDD NANNNRTENR 660
  661 RDIMGDPLHS KPLALNFGSE STPDIRVILG TNHGFLHMFK DAGTTVTESW AFMPYELLPN 720
  721 IRPLKANVPS GVHSVYGMDS SPVAYVKRSA SGSIEKAWLF VGMRRGGKSY YAIDITNPDN 780
  781 PSFMWKVDAN SAGMSELGQT WAKPVIAFIP GWPTGNADAG SAKPVLIVGA GYSPATKDGA 840
  841 AVGTDDSNGR GAFVLDAETG ALVHAFGTSS GSNATKLPGI TDSVPNSVAL LDSNNDRLTD 900
  901 RIYLTDTGAN VWRIDMPSAN PSDSTRPWTA FKFASLGGSS VATDRRFFAE ATVAKTVFTN 960
  961 IAQVTTTDAQ GQSTTVISHQ NIPYDAVVIG SGNRPHPSDK GRTDMFFTLQ DRNVSSKSFN1020
 1021 GTTGNEIPVV LTKDDLYDVT SAPPVGEAQN LAFGAKRGWY YAFGSLGEKS LSAAAIIRGR1080
 1081 VFFTSYVPGD SSSSNQCLVA GVGRLYGFDL HKGTRSYTQT YFEMGERVPD TPQLVIPPGG1140
 1141 KKYMYLIGIG DAGDDMVKKD PDPEDDPEDC VENCVGDGLQ TNKIYYHVSE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle