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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|69159149, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRHFWQSRLN IISYVLGIQA TIMKSANNLT KYSLRSWVLV LALAPTVLVG ILLGSYFTIN  60
   61 RFYELEETLI AQGRSIVEPL AIASEFGLLA DNREVTKRLL SASQLSNSAL IRSIAIFDIQ 120
  121 NHLFVTSHYH KDFESMRYKE ALERLNPDEF ETLEDSLIIR MPIVSNTGKA GINLFAQTGT 180
  181 ASPNAHPGTS QAVPAASMET KEGQQLLGYI AILLNKENAL LEQHRAAIAA FVIVLIGVQF 240
  241 NLFFTFRLVK HVNFPITEMV RVVAKIREGK LDARLDGNLI GELDLLKRGI NAMAGSLSEY 300
  301 HDEMQQNIDQ ATFDLRETLE QIEIQNVELD LAKKRAQEAS QIKSEFLANM SHELRTPLNG 360
  361 VIGFARQLIK TPLHASQLDY IKTIDRSATN LLGIINDILD FSKLEAGKME LEKMPFSLRE 420
  421 TVAETITIIA PSAQAKGLEL VIDIDENVPE HVSGDAMRVN QIITNLVGNA IKFTDSGSVV 480
  481 FKVILVAETD DRVTLRCEVI DTGIGIDDSQ QEYLFQAFGQ ADSSISRRFG GTGLGLVITK 540
  541 RLINKMGGQI GFTSSSEKGS NFWFILPLNL SQFQIGEVLP MDVLHGKSVL LYEPRTLTRE 600
  601 TLNRRLISWQ LSLTSVCSID ELTQTLAKPE PHYDYALISC HGFDTTQALG QQLQQARSKA 660
  661 TSLILLHDCF EHETMVSQLR NSVDILVITP ISDYALARQL IYPPAKNLII PELAPEQSYQ 720
  721 RQRMSVLAVD DNPANLMLID TLLQEVVTNV VTASRGETAV ELAKGQQFDL IFMDIQMPGI 780
  781 DGLAATRLIR QASMNRNTPI IAVTAHALSE EKESILNSGM DGYLPKPIDE NSLKAVIERW 840
  841 VSKPKFTHFD LQTLNWEMCL TQVNQKQDLA LEMLRMLVKS LPETIEHLEH ALEEQSQDKM 900
  901 LYTVHKLHGA SLYCGVPNTQ KLCHALESSL KKLTPILDLE PEILELLDEL TKVESAANQV 960
  961 ITQLSADINH DQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle