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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91792152, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKPLVIAV TFAIFNATSV GAYAANNQAV TELEEVLVNA TRIDESLAKS SRAIVKISAA  60
   61 QLEESQPSSA AQALKHEANI TVTNGPRPSA QGVEIRGLSG NRVLQTVDDA RQNAGSGHRG 120
  121 TYFIDPEMLK SIEVLKGPSS SLWGSGAIGG VVAQYTKSAQ DFLEDGEHFG GYLKQGYETN 180
  181 GSRTKTSGSI YGVQDSIDWL VNGSYLDSNN IKIGKDESLN NSASQGHSAL GKLGWQLDDA 240
  241 QRLELSLRSN NSNELVPSNP SAEVSRSVPL VRRETTDNNL SLVYELNPSD NAYLDAKALI 300
  301 YVNQTDYDEN RVTKGQIDAT EFNTLGLSLS NKSIFGAGLG RTELVYGVDG YKDTIETVRD 360
  361 DKGQTGQRPG NIDGEVSTLG VFVVGKVSLS DTVSVEPALR YDSFSNQSNN LGLETDDSAV 420
  421 SPSLALVWQS TPWLNLSARY DQAFRAPSIE EMYSSGSHYC IPPIPRFLPN GMCNTFAINP 480
  481 DLKAEKAKNK ELKADFSFSE LSATGADDEL NLTLSVFRND VDDFIVQSVS NPLMGIPGFE 540
  541 QTTSWNNVSS AELTGFEISS RYRYNQTRLS VNYGQTQGKD ADTNEYIANI PANKLSLDLS 600
  601 QGIMEGDVKL GTRLSYVASQ TDVPLDNNVA QYDDYKLWDV YVAWEPSMGD LAGLRVDFAI 660
  661 ENIGDEQYKQ AWQTLFEQGR NMKLSARYQF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle