YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|146866288, gi...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTQSRSKQR GVALIVVLLI VAMVVIIATN ITGRNQLSMR RTLNLAQYDQ AYWYAISAEE  60
   61 LAKKILKQDL DDSEGRVHRQ QYWAMADVVF PAEYGEIAGK ITDMRACFNL NALSATTKEV 120
  121 ENGQPKLPLA AKQYKALLVS LGMDDFSADR LTQTLKDYID EDMTASPYGA EDAEYESRNV 180
  181 PYRAANTLMN HRSELRAVMG YTQDIYLKLL PYVCVIPGND RQLLNVNTVE VEQAALLAGM 240
  241 LDNQISVGEA ESIINQRPGD GFAKIEDFYE SSSMGSIKWE GAMKSSFVID SQYFLLASGA 300
  301 KVDNAVFRME SVLKKGGGNK MEVLTRQFGG QK

Type	Start	End	Confidence
Cytoplasmic	1	10	0.84
Transmembrane Helix	11	33	0.80
Non-Cytoplasmic	34	332	0.99