YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125996215, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFNKLVIAM GMACGVILAG CNDSEDSTTP TEPETQLQAF APNGLLKANI RRTTYGVPHI  60
   61 QADNLESLGF GSGYAQAQDN LCVLADGFIK ANSQRSMYFG PHASIDFTTG QPTAEDNGNL 120
  121 ISDFAYKALK IRAQAEEKWP QFSENSRALI QGFTSGYNQY LADVEAGKQT AEPFCGGQPW 180
  181 VKPIAPEDVV TYLFSIALLP GAANFLDLIF YANPGDAQEY MPRIVGPAPS QDQTAFVADM 240
  241 QSKLIARAAR ITTPETNPRG LGSNGWGLGK DKTENGKGMV LGNPHFPHTG NLRFWQSHIT 300
  301 IPGHLDMMGG SLVGMPGPIN IGFNKDLAWT HTFSTAEHFV MYNLELVSGD RMQYLFDGKP 360
  361 MPITKETVSI LVNAGPAGML VAEKDIYTTA KGPMVEAPPA LAPFGWDDGS AFMIQDANMG 420
  421 NMDPVDHWLA MDMATNKEEF QQAFKDYDGV IFNNTMYADK EGNAFYIDDS TVPGLSESAV 480
  481 VLLKTSPDIK AAKAQAGFTI LPGNTSLFSF DGPTPYARAP KLERTDFVQN SNDSFWSTNL 540
  541 NEPLTYFSPM YGPEAGQLSL RTRMGLSLMQ DAAGADGKFS LEELEAAVLS NRSYLAELVL 600
  601 PDLIAQCDAQ GSTPVVVSAS LSKDVTSACT ALKAWNGKQD NDSKGGALLR EFAHQFSQTT 660
  661 MLTQGFDPAN AATTPKTLTT DGSALVALAH SALNLEAAGF ALDAPLGEMQ FVEKSLPDGT 720
  721 PSGSRLPWPG SHNAEGGFNV FSTSLSGDDT LIPQYKYAPV MDVVTGKAMS SGLTAKGYQV 780
  781 RYGSSWMMAV NFTDEGPVAR GILTYSESSN ILTPAFADQS ILYSSEKSFR PLLFKEADIA 840
  841 PAVVSTTELM LQKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle