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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125999509, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWLKRIVIA LFSLALLGVG AIVAAYFYVL PDLPDVSTLK NVQLQTPLRI YSSDGKLISQ  60
   61 FGEKRRIPLK LDEVPKPLLQ AFIATEDARF YEHGGIDPVG VLRAALVMLT TGEKKQGAST 120
  121 ITMQVARNFF LTRDKTIIRK VKEIFISYHI EELLTKDEIL ELYVNRIYLG QRAYGVGAAA 180
  181 QVYFGKDVKD LTLSEMSMIA GLPKAPSTLN PVTSPSRAVA RRNVVLMRMN EVGYISQAEY 240
  241 QAALQEPLVA KYHGAEIDLY APYISEMARD YMVQKYGEEE AYTNGYNVYT TISSDIQLKA 300
  301 QQALRNNVYA YDERHGYRGP AAVLWTDEKP DQAQIKAELA KVASIQELQP AAVISVADQQ 360
  361 ASVMTAKGET KVITWDGLKW ARKFITDKRQ GSVPKSASDM LKVGERIWIR DNGQYLQLSQ 420
  421 VPEVASATVS LDPQNGAIRS LVGGYSFSQS QYNRVTQAKR QLGSNIKPFI YAGALEKGFT 480
  481 LATLINNAPI NKPDISQGTA WRPKNSPDIY GGPTRLRVGL AQSINVMSVR AMRHVGLDAT 540
  541 IAELIKFGFD PNDLPRNESI ALGSSSVTPL QVVTAFNVFA NGGFLLEPFY IDRVEDAYGN 600
  601 VIEKANPTLA CKPSQSLSQP ITPSDPMAFS VTGDSSTEPS APVAQCFEQT GRFAPQIISE 660
  661 QTAFLITEAL KSVIWGGGDW SHGTGWQGTA WRAARLIKRH DIAGKTGTTN ESRDTWFSGF 720
  721 SPVLTSTFWV GFDDHGRQLG RTAWNASAEK DQITGAEAGA KTAGPGWNEF MNSVLQGTPE 780
  781 TTSIPPEGIV SVRIDLATGK LTRKTDYTSA FEYFISGTEP KEYISETQDE NNIFIDAPTD 840
  841 DLFQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle