YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|146865471, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLKKLVGAI TLTAAGVFSA TAMASIDQSL PTYEKASGVS GNLSSVGSDT LANMMTLWAE  60
   61 EFKQMYPNVN IQIQAAGSST APPALTEGTS QFGPMSRKMK PNEIEAFEKH YGYKPTAVRV 120
  121 AIDALAVFVH KDNPIKGLSV EQVDGIFSST HKCGSSDIQR WGELGLDGNW SAKDVQLYGR 180
  181 NSVSGTYGYF KEHALCKGDF KANVNEQPGS ASVVQSVSQS LNAIGYSGIG YKTAGVKAVA 240
  241 IAKKGEEFIE ATAENAANGT YPLSRYLYVY VNKQPNKDLA PMEKEFLRYV LSKQGQQVVE 300
  301 KDGYVTLPKS VVAKDLEQVG IRL

Type	Start	End	Confidence
Signal Peptide	1	24	0.98
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	323	0.99